Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGCCTGTATTCCCAGCTACTTGGGAGGCTGAGGCAGGA
....(((((((((((((((((&))))...................))))))))...))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_005015
GeneSymbolOXA1L
Binding site2122,2162
Score0.846
Seed0
Au0.412
Energy-23.6
Binding len40
Me-9.547
Phylopstem-0.12091210256410265
Phylopflank-0.18261588750000005
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure