Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAGGGCCAGATGCAGTCACTGCTTCAGGTCC
.(((((((((((((((((...&))))))))....)))))...........)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_005018
GeneSymbolPDCD1
Binding site1154,1187
Score0.821
Seed1
Au0.368
Energy-25.5
Binding len33
Me-3.793
Phylopstem-0.20813341249999995
Phylopflank-0.6467082875000001
Longest consecutive pairings8
Position of longest consecutive pairings25
Pairings in 3prime end5
Position3UTR
2D Structure