Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTTTTATCTACAGACATGTCAGGTC
(((((((((....(((((((..&.)))))))...))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005019
GeneSymbolPDE1A
Binding site1127,1153
Score0.923
Seed1
Au0.691
Energy-20.5
Binding len21
Me-12.641
Phylopstem0.2616536444444444
Phylopflank0.61814289875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure