Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTCCGTCATGAACCAGGTGTGCCGGGA
.((((((((((...((......&.))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005035
GeneSymbolPOLRMT
Binding site3502,3531
Score0.846
Seed1
Au0.382
Energy-18.7
Binding len17
Me-9.286
Phylopstem-0.20578890000000002
Phylopflank0.57820438375
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure