Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTCCCCAGATACCTCCTATATTTCCATATTGTGTGCAAAGGA
.(((.(((((((((((.((...&.)).)))))))))))..))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005057
GeneSymbolRBBP5
Binding site2200,2243
Score0.923
Seed0
Au0.603
Energy-18.6
Binding len21
Me-7.912
Phylopstem0.6218718181818182
Phylopflank0.7503915212500001
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end4
Position3UTR
2D Structure