Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCTGAGAACACGTTGCCAGGG
.(((((((.......(((((((&))))))).........))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005063
GeneSymbolSCD
Binding site2629,2653
Score0.846
Seed1
Au0.529
Energy-17.5
Binding len24
Me-15.145
Phylopstem0.1736377
Phylopflank0.06221060875000013
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end7
Position3UTR
2D Structure