Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCTGCTTTGACTATGTCCTGCCTCCTATTCTGCAGTGCCAGGC
.((((((((....((((((...&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005067
GeneSymbolSIAH2
Binding site562,607
Score0.846
Seed1
Au0.412
Energy-20.5
Binding len16
Me-12.497
Phylopstem0.5935652
Phylopflank-0.018591802500000018
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure