Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGAATGAAGTGAGGCCAGTGGCCGGGTCTG
((((((.((.((((((((...&))))........)))).....)).)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_005080
GeneSymbolXBP1
Binding site498,529
Score0.846
Seed0
Au0.397
Energy-21.7
Binding len31
Me-6.724
Phylopstem0.23092853125000007
Phylopflank0.6493084037500002
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure