Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATGCAATAAAGCGGTGTTTGGCGTTCTCCTGCATTGTAGTGCGGGTA
(((((...((((((((((....&.))))))))))...))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005082
GeneSymbolTRIM25
Binding site4708,4757
Score0.923
Seed0
Au0.544
Energy-21.2
Binding len20
Me-9.696
Phylopstem2.3599286100000003
Phylopflank1.1110517432499998
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure