Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCTGCGGCCTTGTGTGCTTGTTGGCCTGCTTTGTGATGTGGAAACATAGGTA
(((((((((((((((((((((.&))))))))...))))))))).............................)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005086
GeneSymbolSSPN
Binding site708,762
Score0.846
Seed1
Au0.529
Energy-18.6
Binding len54
Me-3.938
Phylopstem4.996353135849057
Phylopflank3.357905815625
Longest consecutive pairings9
Position of longest consecutive pairings34
Pairings in 3prime end7
PositionCDS
2D Structure