Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCTTTGTTGTGTTATAAGCAATGTGTGCTGGAGTG
((((((((((((.(((......&.))).)))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005092
GeneSymbolTNFSF18
Binding site2255,2292
Score0.846
Seed1
Au0.603
Energy-17.1
Binding len19
Me-5.227
Phylopstem0.8117464076923077
Phylopflank0.7276904162499999
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end2
Position3UTR
2D Structure