Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTTGGCCAGGTT
(((((((..(((..........&)))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005105
GeneSymbolRBM8A
Binding site4424,4437
Score0.923
Seed1
Au0.544
Energy-16.3
Binding len13
Me-10.422
Phylopstem5.067428571428572
Phylopflank4.574550000000001
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure