Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTACAATGTTTTTGTCAGT
..((((((.(((.(((((((((&))))))))).)))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005107
GeneSymbolEXOG
Binding site1463,1486
Score0.846
Seed1
Au0.706
Energy-18.5
Binding len23
Me-7.303
Phylopstem0.24808944444444445
Phylopflank0.10530735749999999
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure