Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCTACGAGGCCCTTCTCCCCCAGTATGCCAA
...((((((((..(((((((((&)))))))))................)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005108
GeneSymbolXYLB
Binding site1615,1649
Score0.846
Seed0
Au0.456
Energy-16.5
Binding len34
Me-11.15
Phylopstem2.185092888888889
Phylopflank1.23445418375
Longest consecutive pairings9
Position of longest consecutive pairings25
Pairings in 3prime end8
PositionCDS
2D Structure