Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGGGGCGCCGGCTGCAGA
(((((((((((.((.(((((.&))))).)).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001369201
GeneSymbolSMIM38
Binding site693,715
Score0.846
Seed1
Au0.279
Energy-25.9
Binding len22
Me-8.02
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure