Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATGTACCAATAAGTGGAGATTCCTCCTTATGATGTATGCTAGGTT
((((((((((((.(((((....&.))))).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005109
GeneSymbolOXSR1
Binding site4373,4419
Score1.0
Seed1
Au0.676
Energy-20.0
Binding len20
Me-5.227
Phylopstem0.9270213308333334
Phylopflank1.9205376721249996
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure