Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGAAGGCTTCATGGAGGAATTGCCATAAAGCTGGGG
...(((.(((((((((((((.&))))))))))).....................)).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_005114
GeneSymbolHS3ST1
Binding site5098,5137
Score0.923
Seed0
Au0.456
Energy-26.8
Binding len39
Me-8.058
Phylopstem-0.23248524
Phylopflank-0.0347607375
Longest consecutive pairings11
Position of longest consecutive pairings28
Pairings in 3prime end7
Position3UTR
2D Structure