Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGCCACTGCATTGTTTTGCCAA
...(((((.(((((((((....&.)))))))))..))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005116
GeneSymbolSLC23A2
Binding site4150,4173
Score0.923
Seed0
Au0.588
Energy-19.4
Binding len18
Me-7.571
Phylopstem-0.027510600000000014
Phylopflank0.00706596499999999
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end4
Position3UTR
2D Structure