Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCTGCATAATGTTGTTCATGCCAGC
..((((((((((((((((((..&))))))))..))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005154
GeneSymbolUSP8
Binding site17696,17722
Score0.923
Seed1
Au0.691
Energy-18.4
Binding len26
Me-4.957
Phylopstem-0.12206263999999994
Phylopflank0.05364218750000003
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end6
Position3UTR
2D Structure