Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCTACTCGCAGGGGGGCCTTGTGTGCCGGGC
.((((((((((((.((......&.)).)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005155
GeneSymbolPPT2
Binding site593,628
Score0.923
Seed1
Au0.426
Energy-22.1
Binding len17
Me-4.65
Phylopstem4.876473333333332
Phylopflank3.7453088437499997
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure