Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATTGGAACCGTGTTTGGCAGCTTGATCATTGGCTATGCCAGGA
.((((((((((((((.......&.)))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005175
GeneSymbolATP5MC1
Binding site386,431
Score1.0
Seed1
Au0.456
Energy-19.3
Binding len18
Me-4.026
Phylopstem6.089472687499999
Phylopflank6.2322351471249995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure