Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTCTGCAGTTGGAAACAAGAAGCTGTTGTGGGCATTGTGTCGGGCCAGGG
.(((((((((((((((......&.)))))))))...)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005235
GeneSymbolERBB4
Binding site9236,9287
Score0.962
Seed1
Au0.485
Energy-21.9
Binding len20
Me-3.793
Phylopstem6.210400611111112
Phylopflank4.883398982499999
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end2
Position3UTR
2D Structure