Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCACCGTCTATGCCGGGC
.(((((((((...(((((....&))))).....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005236
GeneSymbolERCC4
Binding site2969,2989
Score0.923
Seed1
Au0.529
Energy-18.9
Binding len20
Me-11.254
Phylopstem-0.000651190000000049
Phylopflank-0.309997867875
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure