Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCATCCTTAAACACTTGAATTTATATTGTATGGTAGT
..(((.((((((((((((((((&.)))))))))))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005259
GeneSymbolMSTN
Binding site1682,1722
Score0.808
Seed0
Au0.75
Energy-20.8
Binding len22
Me-6.858
Phylopstem4.53712638125
Phylopflank5.714576615
Longest consecutive pairings16
Position of longest consecutive pairings5
Pairings in 3prime end8
Position3UTR
2D Structure