Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACATAGTTAGTCCGGTAGTGTAACAGTAACGGGTTTTACGTAAATGCCAGGG
.((((((((...(((((((...&.)))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005260
GeneSymbolGDF9
Binding site1630,1684
Score0.962
Seed1
Au0.588
Energy-19.4
Binding len19
Me-11.207
Phylopstem0.5565597999999999
Phylopflank0.37735429
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure