Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATCCCTGCAGCTGTT
..((((((((((..((((((.&))))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001369373
GeneSymbolDCX
Binding site8352,8371
Score1.0
Seed1
Au0.544
Energy-24.8
Binding len19
Me-7.103
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure