Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCAGGTGGCCAGGA
.((((((.(((..(((......&))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005335
GeneSymbolHCLS1
Binding site860,874
Score0.923
Seed1
Au0.412
Energy-15.6
Binding len14
Me-10.743
Phylopstem1.7038566666666668
Phylopflank0.9567602400000002
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure