Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAAGTGCTTTCACATCCTTATAGCAATTCTGCAAGGTAGCCAGGG
.((((((.(((..((((((...&.))))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005337
GeneSymbolNCKAP1L
Binding site5970,6015
Score1.0
Seed1
Au0.574
Energy-22.9
Binding len19
Me-10.743
Phylopstem0.35522783333333335
Phylopflank0.427885084
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure