Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGTGTGTCAGTGG
.((((((((((((.........&))))))))))).).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005342
GeneSymbolHMGB3
Binding site2255,2269
Score0.923
Seed1
Au0.647
Energy-15.0
Binding len14
Me-5.619
Phylopstem-0.15997840769230767
Phylopflank-0.18423829474999998
Longest consecutive pairings11
Position of longest consecutive pairings3
Pairings in 3prime end0
Position3UTR
2D Structure