Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGCCGGTGGTCCCGGGCCTGGGGGCTTCGGGGCTCAGGGTCC
.(((((((.(((((((((.((&.)))))....))))))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_005345
GeneSymbolHSPA1A
Binding site2050,2094
Score0.923
Seed1
Au0.25
Energy-27.6
Binding len24
Me-4.85
Phylopstem0.33542446923076924
Phylopflank2.0803809887500004
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure