Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTTGCCTGTTGGCCAGGC
.((((((..(((..(((((...&))))).)))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005359
GeneSymbolSMAD4
Binding site4465,4483
Score0.846
Seed1
Au0.5
Energy-17.8
Binding len18
Me-9.309
Phylopstem-0.051666666666666645
Phylopflank-0.011999999999999983
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure