Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCAGCGCCAAGTGGCCACTGGCATCGCAGCTT
....(((((((((((((((..&))))))))...................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001369390
GeneSymbolPRKAR1A
Binding site1315,1350
Score0.846
Seed0
Au0.515
Energy-18.9
Binding len35
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings27
Pairings in 3prime end6
Position3UTR
2D Structure