Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAGTCTACTGTGTGTGTGTGCCTCTGGA
.((.((((((((..((((((((&))))))))......))))))))...)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005385
GeneSymbolNKTR
Binding site5470,5498
Score0.846
Seed0
Au0.559
Energy-19.9
Binding len28
Me-8.971
Phylopstem-0.46675807499999994
Phylopflank0.030760532499999996
Longest consecutive pairings8
Position of longest consecutive pairings20
Pairings in 3prime end8
Position3UTR
2D Structure