Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AATTTCCCGTCTGTATGCTAGA
..((((((((((..........&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005391
GeneSymbolPDK3
Binding site1156,1178
Score0.846
Seed1
Au0.632
Energy-15.3
Binding len12
Me-8.071
Phylopstem4.189638970000001
Phylopflank5.088250179999999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure