Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGGAGGCAGAGAGGGCA
.(.((((...((((((((...&))))))))....))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_005397
GeneSymbolPODXL
Binding site5572,5590
Score0.923
Seed0
Au0.515
Energy-23.2
Binding len18
Me-9.963
Phylopstem-0.31637650000000006
Phylopflank0.17930924624999994
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end5
Position3UTR
2D Structure