Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATTTTACAACTGCAGTA
.....((((((((((((((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001369395
GeneSymbolPTPRZ1
Binding site7702,7719
Score1.0
Seed0
Au0.706
Energy-21.6
Binding len17
Me-13.666
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure