Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGGGTACAGGGCATTCTAGGATGTGTGCCAGGG
.(((((((((((.(.((((...&.)))).).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005401
GeneSymbolPTPN14
Binding site8974,9008
Score1.0
Seed1
Au0.456
Energy-25.4
Binding len20
Me-5.818
Phylopstem0.5345274363636364
Phylopflank1.7465737500000005
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure