Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACAGACGGCCATGTACGAACCGCCAGAAGGCTTGTGAGCCAGGA
.((((((.(((((.((......&.))))))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005429
GeneSymbolVEGFC
Binding site1759,1805
Score0.923
Seed1
Au0.5
Energy-18.2
Binding len16
Me-6.964
Phylopstem0.026941736666666688
Phylopflank0.2755478787500001
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end2
PositionCDS
2D Structure