Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGACTTGCTAGGCCTCTGCTGTGTGCTGGGG
.(((((((((((..(((((...&.)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005442
GeneSymbolEOMES
Binding site2691,2722
Score0.923
Seed1
Au0.397
Energy-21.9
Binding len18
Me-5.939
Phylopstem2.449889272727273
Phylopflank1.85643855125
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure