Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCACTGATGTTTACCTTGATCACCTACCCAACATTGTACTTGCCAGGTT
((((((((((((((((......&.))))))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005445
GeneSymbolSMC3
Binding site4630,4680
Score1.0
Seed1
Au0.618
Energy-22.6
Binding len20
Me-3.938
Phylopstem0.14765897777777778
Phylopflank0.19224745175000005
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end2
Position3UTR
2D Structure