Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGCGGATCACCTGAGGTCAGGAGTTC
.(((((((..(((((((((((&))))))..........))))))))).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_005508
GeneSymbolCCR4
Binding site1980,2010
Score0.846
Seed1
Au0.382
Energy-21.3
Binding len30
Me-6.092
Phylopstem-0.34472271428571427
Phylopflank-0.08082825250000004
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end8
Position3UTR
2D Structure