Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGAAAAGGAGGGAGCTACTCTCAGGCTGCGTGCAGCGACAGTGCCCAGGGCTCTG
((((((((((((((((((.((&.)).)))).........))))))).................)))).))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_005514
GeneSymbolHLA-B
Binding site1032,1090
Score0.846
Seed1
Au0.426
Energy-23.9
Binding len50
Me-3.938
Phylopstem0.5990040355555556
Phylopflank-0.5912296850000001
Longest consecutive pairings7
Position of longest consecutive pairings26
Pairings in 3prime end7
PositionCDS
2D Structure