Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCTGCGGTTTTGGCTGGGTA
(((((((......(((((((((&)))))))))......))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005517
GeneSymbolHMGN2
Binding site1575,1598
Score0.846
Seed1
Au0.515
Energy-19.2
Binding len23
Me-16.011
Phylopstem-0.1231577
Phylopflank0.021671100000000006
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure