Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGAGAAGGAGGGTCTC
(((((((....(((((.(((.&))).)))))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_005522
GeneSymbolHOXA1
Binding site947,964
Score1.0
Seed1
Au0.397
Energy-20.3
Binding len17
Me-11.375
Phylopstem1.6079557142857142
Phylopflank2.976124075
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure