Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGAAGAGGGCTGCAAATCCTTGTGGGA
...((((((((((((((((((&)))))..)))))))))).........))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_005523
GeneSymbolHOXA11
Binding site1556,1586
Score1.0
Seed0
Au0.544
Energy-27.9
Binding len30
Me-6.515
Phylopstem2.850746103448276
Phylopflank0.753358765
Longest consecutive pairings10
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure