Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCCAAATTGCCAGGG
.(((((((......((((....&)))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005582
GeneSymbolCD180
Binding site72,89
Score0.846
Seed1
Au0.5
Energy-17.2
Binding len17
Me-14.41
Phylopstem0.1475350857142857
Phylopflank0.08723280937499997
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure