Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTCAATGCCAGGA
.(((((((((((..........&)))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005590
GeneSymbolMRE11
Binding site3165,3179
Score1.0
Seed1
Au0.735
Energy-15.2
Binding len14
Me-6.908
Phylopstem0.1323153076923077
Phylopflank0.14448437375000006
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure