Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTCAATGCCAGGA
.(((((((((((..........&)))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_005591
GeneSymbolMRE11
Binding site3142,3156
Score0.923
Seed1
Au0.735
Energy-15.2
Binding len14
Me-6.908
Phylopstem0.15283854615384615
Phylopflank0.11258019000000002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure