Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTAGGGCAATAATCAGTTGCAT
.((((((((..(((.(((((.&))))).)))......)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001369434
GeneSymbolCALCRL
Binding site5412,5436
Score0.885
Seed1
Au0.706
Energy-19.1
Binding len24
Me-8.596
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure