Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGGGGCAAGAGGCTGCAATATTCCGTCCTGGGTGTCTG
((((((((((((((((((((.&)))))....))))))))).............)).)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_005629
GeneSymbolSLC6A8
Binding site3573,3612
Score0.923
Seed1
Au0.382
Energy-27.3
Binding len39
Me-3.938
Phylopstem-0.5384624368421052
Phylopflank-0.061510502749999973
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end7
Position3UTR
2D Structure